In my experience, the extruder clicking but printing is ok suggest the extruder extrude too much filament to fast. try to reduce the extrusion rate from 100% to 90% or even lower.
However, if the extruder clicking but printing is not ok, then your 3rd party filament might require higher temperature than 210C that Da Vinci Jr uses by default. In that case, change the printing temperature in G-code to find optimal temperature for your filament.
Switch between 3rd party filament and stock filament may jam your extruder, that may also cause clicking noise, make sure your filament can go through the print head smoothly by cleaning the print nozzle.
(Da Vinci 1.0, Jr. 1.0 RAMPS, miniMaker) X4, (Creality CR-10S, CR-10 mini, Ender-3) X4, Anycubic MEGA X4, Anycubic Chrion X1, ADMILAB Gantry X2 (MonoPrice Maker Select V2, Plus, Ultimate)X4--Select mini X1, Anycubic photon X4, Wanhao duplicate D7 X1.
iNSTONE Inventor Pro X2, CTC Dual X2, ANET-A8, Hictop 3DP-11, Solidoodle Press, FLSUN I3 2017X1